Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Gm27838-201ENSMUST00000184829 128 ntBASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Gm12091-201ENSMUST00000146791 830 ntBASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col25a1Q99MQ5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col25a1Q99MQ5 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Gm8410-201ENSMUST00000117225 605 ntBASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col25a1Q99MQ5 Dancr-204ENSMUST00000132389 2347 ntBASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms