Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Gm14127-201ENSMUST00000117906 678 ntBASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Mir8102-201ENSMUST00000184148 139 ntBASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Gm2272-201ENSMUST00000194903 582 ntBASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nkx6-1Q99MA9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Gm38294-201ENSMUST00000192831 381 ntBASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-1Q99MA9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Gm6415-201ENSMUST00000118488 348 ntBASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-1Q99MA9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms