Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Gm11424-201ENSMUST00000121929 829 ntBASIC16.17■□□□□ 0.18
Clp1Q99LI9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clp1Q99LI9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.17■□□□□ 0.18
Clp1Q99LI9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clp1Q99LI9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Clp1Q99LI9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clp1Q99LI9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clp1Q99LI9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clp1Q99LI9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clp1Q99LI9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Clp1Q99LI9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.16■□□□□ 0.18
Clp1Q99LI9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clp1Q99LI9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.16■□□□□ 0.18
Clp1Q99LI9 Gm25144-201ENSMUST00000179561 110 ntBASIC16.16■□□□□ 0.18
Clp1Q99LI9 Gm25352-201ENSMUST00000179815 110 ntBASIC16.16■□□□□ 0.18
Clp1Q99LI9 Gm29541-201ENSMUST00000191351 678 ntBASIC16.16■□□□□ 0.18
Clp1Q99LI9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clp1Q99LI9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.16■□□□□ 0.18
Clp1Q99LI9 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.16■□□□□ 0.18
Clp1Q99LI9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clp1Q99LI9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clp1Q99LI9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clp1Q99LI9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Clp1Q99LI9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Clp1Q99LI9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clp1Q99LI9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clp1Q99LI9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clp1Q99LI9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.15■□□□□ 0.18
Clp1Q99LI9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clp1Q99LI9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clp1Q99LI9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clp1Q99LI9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clp1Q99LI9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clp1Q99LI9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clp1Q99LI9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clp1Q99LI9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
Clp1Q99LI9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clp1Q99LI9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Clp1Q99LI9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.15■□□□□ 0.18
Clp1Q99LI9 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.15■□□□□ 0.18
Clp1Q99LI9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clp1Q99LI9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clp1Q99LI9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clp1Q99LI9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Clp1Q99LI9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clp1Q99LI9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clp1Q99LI9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clp1Q99LI9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Gm2423-201ENSMUST00000074863 733 ntBASIC16.14■□□□□ 0.17
Clp1Q99LI9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clp1Q99LI9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clp1Q99LI9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clp1Q99LI9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Clp1Q99LI9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Clp1Q99LI9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Clp1Q99LI9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms