Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.9■□□□□ 0.62
RtcbQ99LF4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RtcbQ99LF4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RtcbQ99LF4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RtcbQ99LF4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RtcbQ99LF4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.9■□□□□ 0.62
RtcbQ99LF4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
RtcbQ99LF4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RtcbQ99LF4 Gm15487-201ENSMUST00000122373 465 ntBASIC18.9■□□□□ 0.62
RtcbQ99LF4 Gm44855-201ENSMUST00000205725 362 ntBASIC18.9■□□□□ 0.62
RtcbQ99LF4 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RtcbQ99LF4 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RtcbQ99LF4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RtcbQ99LF4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RtcbQ99LF4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RtcbQ99LF4 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RtcbQ99LF4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RtcbQ99LF4 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RtcbQ99LF4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.9■□□□□ 0.62
RtcbQ99LF4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RtcbQ99LF4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RtcbQ99LF4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RtcbQ99LF4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RtcbQ99LF4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RtcbQ99LF4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RtcbQ99LF4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RtcbQ99LF4 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RtcbQ99LF4 Gm27920-201ENSMUST00000183953 96 ntBASIC18.89■□□□□ 0.61
RtcbQ99LF4 Gm18766-201ENSMUST00000189811 808 ntBASIC18.89■□□□□ 0.61
RtcbQ99LF4 Gm7653-201ENSMUST00000214567 508 ntBASIC18.89■□□□□ 0.61
RtcbQ99LF4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RtcbQ99LF4 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RtcbQ99LF4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RtcbQ99LF4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RtcbQ99LF4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RtcbQ99LF4 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RtcbQ99LF4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RtcbQ99LF4 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RtcbQ99LF4 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC18.89■□□□□ 0.61
RtcbQ99LF4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
RtcbQ99LF4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RtcbQ99LF4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RtcbQ99LF4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RtcbQ99LF4 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RtcbQ99LF4 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RtcbQ99LF4 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.88■□□□□ 0.61
RtcbQ99LF4 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.88■□□□□ 0.61
RtcbQ99LF4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.88■□□□□ 0.61
RtcbQ99LF4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RtcbQ99LF4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RtcbQ99LF4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RtcbQ99LF4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RtcbQ99LF4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RtcbQ99LF4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RtcbQ99LF4 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.88■□□□□ 0.61
RtcbQ99LF4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RtcbQ99LF4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RtcbQ99LF4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.87■□□□□ 0.61
RtcbQ99LF4 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC18.87■□□□□ 0.61
RtcbQ99LF4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RtcbQ99LF4 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RtcbQ99LF4 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RtcbQ99LF4 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RtcbQ99LF4 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RtcbQ99LF4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RtcbQ99LF4 Syt7-204ENSMUST00000223586 1344 ntBASIC18.87■□□□□ 0.61
RtcbQ99LF4 AC132863.2-201ENSMUST00000226643 799 ntBASIC18.87■□□□□ 0.61
RtcbQ99LF4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RtcbQ99LF4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RtcbQ99LF4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RtcbQ99LF4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RtcbQ99LF4 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RtcbQ99LF4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RtcbQ99LF4 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RtcbQ99LF4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RtcbQ99LF4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RtcbQ99LF4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RtcbQ99LF4 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RtcbQ99LF4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RtcbQ99LF4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RtcbQ99LF4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RtcbQ99LF4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RtcbQ99LF4 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RtcbQ99LF4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.86■□□□□ 0.61
RtcbQ99LF4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.86■□□□□ 0.61
RtcbQ99LF4 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms