Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm22065-201ENSMUST00000103753 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm22066-201ENSMUST00000103761 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm24932-201ENSMUST00000103763 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm24115-201ENSMUST00000103799 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm22190-201ENSMUST00000103827 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm22191-201ENSMUST00000103831 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm24721-201ENSMUST00000103849 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm28018-201ENSMUST00000103869 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm26399-201ENSMUST00000103937 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm9385-201ENSMUST00000117563 472 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm25349-201ENSMUST00000177728 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm23616-201ENSMUST00000177797 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm25871-201ENSMUST00000177816 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm24752-201ENSMUST00000178240 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm24496-201ENSMUST00000178287 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm25649-201ENSMUST00000178476 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm25548-201ENSMUST00000178681 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm23147-201ENSMUST00000178841 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm26095-201ENSMUST00000179270 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm22171-201ENSMUST00000179283 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm23936-201ENSMUST00000179354 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm22619-201ENSMUST00000179516 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm25255-201ENSMUST00000179579 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm24755-201ENSMUST00000179691 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm26506-201ENSMUST00000179692 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm25086-201ENSMUST00000179931 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm23243-201ENSMUST00000180047 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm24659-201ENSMUST00000180212 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm24169-201ENSMUST00000180244 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm23689-201ENSMUST00000180354 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm27359-201ENSMUST00000184153 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm27785-201ENSMUST00000184268 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm27466-201ENSMUST00000184396 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm27703-201ENSMUST00000184836 110 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cstf1Q99LC2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.33■□□□□ 0.05
Cstf1Q99LC2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cstf1Q99LC2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cstf1Q99LC2 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cstf1Q99LC2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cstf1Q99LC2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Gm13216-201ENSMUST00000117145 591 ntBASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Gm18057-201ENSMUST00000208220 503 ntBASIC15.33■□□□□ 0.04
Cstf1Q99LC2 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.33■□□□□ 0.04
Cstf1Q99LC2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cstf1Q99LC2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms