Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.04□□□□□ -0.16
Lims1Q99JW4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.03□□□□□ -0.16
Lims1Q99JW4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lims1Q99JW4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.03□□□□□ -0.16
Lims1Q99JW4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.03□□□□□ -0.16
Lims1Q99JW4 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.03□□□□□ -0.16
Lims1Q99JW4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lims1Q99JW4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lims1Q99JW4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lims1Q99JW4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lims1Q99JW4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Lims1Q99JW4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lims1Q99JW4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lims1Q99JW4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Lims1Q99JW4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Lims1Q99JW4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lims1Q99JW4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lims1Q99JW4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lims1Q99JW4 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.02□□□□□ -0.16
Lims1Q99JW4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.02□□□□□ -0.16
Lims1Q99JW4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lims1Q99JW4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Lims1Q99JW4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Lims1Q99JW4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims1Q99JW4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Gm27742-201ENSMUST00000184667 60 ntBASIC14.02□□□□□ -0.17
Lims1Q99JW4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Lims1Q99JW4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims1Q99JW4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lims1Q99JW4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms