Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Thumpd1Q99J36 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd1Q99J36 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Thumpd1Q99J36 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Thumpd1Q99J36 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd1Q99J36 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
Thumpd1Q99J36 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd1Q99J36 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd1Q99J36 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd1Q99J36 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd1Q99J36 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Thumpd1Q99J36 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd1Q99J36 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd1Q99J36 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd1Q99J36 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd1Q99J36 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd1Q99J36 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd1Q99J36 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd1Q99J36 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd1Q99J36 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Gm25406-201ENSMUST00000157599 105 ntBASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.71□□□□□ -0.21
Thumpd1Q99J36 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd1Q99J36 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Thumpd1Q99J36 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Thumpd1Q99J36 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Thumpd1Q99J36 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.71□□□□□ -0.22
Thumpd1Q99J36 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Thumpd1Q99J36 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Thumpd1Q99J36 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Thumpd1Q99J36 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
Thumpd1Q99J36 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Thumpd1Q99J36 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Thumpd1Q99J36 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.7□□□□□ -0.22
Thumpd1Q99J36 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Gm7889-201ENSMUST00000185591 958 ntBASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms