Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Gm11779-201ENSMUST00000118541 368 ntBASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Gm27300-201ENSMUST00000184085 97 ntBASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Gm27335-201ENSMUST00000184758 97 ntBASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Gm15467-201ENSMUST00000120582 445 ntBASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdha11Q91Y19 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha11Q91Y19 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Gm5264-201ENSMUST00000190584 848 ntBASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha11Q91Y19 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms