Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Gm38313-201ENSMUST00000191953 1266 ntBASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdhb20Q91XZ9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Gm16112-201ENSMUST00000159075 382 ntBASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Gm28439-201ENSMUST00000187714 876 ntBASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Gm37153-201ENSMUST00000193637 231 ntBASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb20Q91XZ9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Gm16337-201ENSMUST00000160368 917 ntTSL 3 BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Gm25025-201ENSMUST00000175018 111 ntBASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Gm10297-201ENSMUST00000207136 651 ntBASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 AW822252-206ENSMUST00000208904 237 ntBASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms