Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Gm33142-201ENSMUST00000193913 867 ntBASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb4Q91XZ6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Gm7284-201ENSMUST00000131667 944 ntBASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb4Q91XZ6 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms