Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb8Q91XZ2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.05■□□□□ -0
Pcdhb8Q91XZ2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb8Q91XZ2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb8Q91XZ2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb8Q91XZ2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb8Q91XZ2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb8Q91XZ2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb8Q91XZ2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb8Q91XZ2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb8Q91XZ2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb8Q91XZ2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Gm8097-201ENSMUST00000117903 829 ntBASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb8Q91XZ2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb8Q91XZ2 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.02■□□□□ -0
Pcdhb8Q91XZ2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.02■□□□□ -0
Pcdhb8Q91XZ2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb8Q91XZ2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb8Q91XZ2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb8Q91XZ2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb8Q91XZ2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb8Q91XZ2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb8Q91XZ2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb8Q91XZ2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb8Q91XZ2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb8Q91XZ2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb8Q91XZ2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb8Q91XZ2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb8Q91XZ2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb8Q91XZ2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.02■□□□□ -0
Pcdhb8Q91XZ2 Gm21362-201ENSMUST00000194272 928 ntBASIC15.02■□□□□ -0
Pcdhb8Q91XZ2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.02■□□□□ -0
Pcdhb8Q91XZ2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Pcdhb8Q91XZ2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb8Q91XZ2 BC037039-201ENSMUST00000192003 2205 ntBASIC15.02□□□□□ -0.01
Pcdhb8Q91XZ2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb8Q91XZ2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb8Q91XZ2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb8Q91XZ2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Pcdhb8Q91XZ2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb8Q91XZ2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb8Q91XZ2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb8Q91XZ2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb8Q91XZ2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Pcdhb8Q91XZ2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb8Q91XZ2 Sybu-209ENSMUST00000228639 4113 ntBASIC15.02□□□□□ -0.01
Pcdhb8Q91XZ2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb8Q91XZ2 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.01□□□□□ -0.01
Pcdhb8Q91XZ2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms