Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Gm7787-201ENSMUST00000216858 688 ntBASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhga6Q91XY2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga6Q91XY2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 Gm4899-201ENSMUST00000178708 719 ntBASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga6Q91XY2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga6Q91XY2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga6Q91XY2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga6Q91XY2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Pcdhga6Q91XY2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga6Q91XY2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga6Q91XY2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga6Q91XY2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhga6Q91XY2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga6Q91XY2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga6Q91XY2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhga6Q91XY2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pcdhga6Q91XY2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga6Q91XY2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pcdhga6Q91XY2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga6Q91XY2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms