Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga9Q91XX9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhga9Q91XX9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhga9Q91XX9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Pcdhga9Q91XX9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Grk6-207ENSMUST00000225925 2769 ntBASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Gm6550-201ENSMUST00000187574 993 ntBASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 AV026068-213ENSMUST00000223675 1171 ntBASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Psmb5-202ENSMUST00000227257 622 ntBASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Gm15590-201ENSMUST00000078419 552 ntBASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhga9Q91XX9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Gm11594-201ENSMUST00000122313 162 ntBASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Gm2213-201ENSMUST00000197485 688 ntBASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhga9Q91XX9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Gm7222-201ENSMUST00000117512 906 ntBASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms