Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tram1Q91V04 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tram1Q91V04 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tram1Q91V04 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Tram1Q91V04 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tram1Q91V04 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tram1Q91V04 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tram1Q91V04 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tram1Q91V04 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tram1Q91V04 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tram1Q91V04 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tram1Q91V04 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Tram1Q91V04 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Tram1Q91V04 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tram1Q91V04 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.25□□□□□ -0.29
Tram1Q91V04 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tram1Q91V04 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tram1Q91V04 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.25□□□□□ -0.29
Tram1Q91V04 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tram1Q91V04 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.25□□□□□ -0.29
Tram1Q91V04 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tram1Q91V04 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tram1Q91V04 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tram1Q91V04 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.25□□□□□ -0.29
Tram1Q91V04 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Tram1Q91V04 Gm12527-201ENSMUST00000117967 564 ntBASIC13.25□□□□□ -0.29
Tram1Q91V04 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.25□□□□□ -0.29
Tram1Q91V04 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.25□□□□□ -0.29
Tram1Q91V04 Gm7213-201ENSMUST00000215977 950 ntBASIC13.25□□□□□ -0.29
Tram1Q91V04 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tram1Q91V04 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tram1Q91V04 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tram1Q91V04 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Tram1Q91V04 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tram1Q91V04 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Tram1Q91V04 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Tram1Q91V04 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tram1Q91V04 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tram1Q91V04 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tram1Q91V04 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tram1Q91V04 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tram1Q91V04 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Tram1Q91V04 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.24□□□□□ -0.29
Tram1Q91V04 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.24□□□□□ -0.29
Tram1Q91V04 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Tram1Q91V04 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Tram1Q91V04 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Tram1Q91V04 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.24□□□□□ -0.29
Tram1Q91V04 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.24□□□□□ -0.29
Tram1Q91V04 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Tram1Q91V04 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.24□□□□□ -0.29
Tram1Q91V04 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Tram1Q91V04 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.24□□□□□ -0.29
Tram1Q91V04 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.24□□□□□ -0.29
Tram1Q91V04 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.24□□□□□ -0.29
Tram1Q91V04 Gm21814-202ENSMUST00000203277 873 ntBASIC13.24□□□□□ -0.29
Tram1Q91V04 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.24□□□□□ -0.29
Tram1Q91V04 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.24□□□□□ -0.29
Tram1Q91V04 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tram1Q91V04 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.23□□□□□ -0.29
Tram1Q91V04 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.23□□□□□ -0.29
Tram1Q91V04 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Tram1Q91V04 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Tram1Q91V04 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Tram1Q91V04 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms