Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
TraipQ8VIG6 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.33■□□□□ 0.2
TraipQ8VIG6 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TraipQ8VIG6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TraipQ8VIG6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TraipQ8VIG6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TraipQ8VIG6 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TraipQ8VIG6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TraipQ8VIG6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TraipQ8VIG6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TraipQ8VIG6 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TraipQ8VIG6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TraipQ8VIG6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TraipQ8VIG6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TraipQ8VIG6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TraipQ8VIG6 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TraipQ8VIG6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TraipQ8VIG6 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.32■□□□□ 0.2
TraipQ8VIG6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.32■□□□□ 0.2
TraipQ8VIG6 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TraipQ8VIG6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TraipQ8VIG6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TraipQ8VIG6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TraipQ8VIG6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TraipQ8VIG6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TraipQ8VIG6 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TraipQ8VIG6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TraipQ8VIG6 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TraipQ8VIG6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TraipQ8VIG6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TraipQ8VIG6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TraipQ8VIG6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TraipQ8VIG6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TraipQ8VIG6 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.31■□□□□ 0.2
TraipQ8VIG6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TraipQ8VIG6 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TraipQ8VIG6 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.31■□□□□ 0.2
TraipQ8VIG6 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.31■□□□□ 0.2
TraipQ8VIG6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.31■□□□□ 0.2
TraipQ8VIG6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TraipQ8VIG6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TraipQ8VIG6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TraipQ8VIG6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TraipQ8VIG6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TraipQ8VIG6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TraipQ8VIG6 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.3■□□□□ 0.2
TraipQ8VIG6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TraipQ8VIG6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TraipQ8VIG6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TraipQ8VIG6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.3■□□□□ 0.2
TraipQ8VIG6 Gm9385-201ENSMUST00000117563 472 ntBASIC16.3■□□□□ 0.2
TraipQ8VIG6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.3■□□□□ 0.2
TraipQ8VIG6 Rprl2-201ENSMUST00000157150 290 ntBASIC16.3■□□□□ 0.2
TraipQ8VIG6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TraipQ8VIG6 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.3■□□□□ 0.2
TraipQ8VIG6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TraipQ8VIG6 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TraipQ8VIG6 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TraipQ8VIG6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.3■□□□□ 0.2
TraipQ8VIG6 Gm10154-201ENSMUST00000084445 354 ntBASIC16.3■□□□□ 0.2
TraipQ8VIG6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.3■□□□□ 0.2
TraipQ8VIG6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TraipQ8VIG6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TraipQ8VIG6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TraipQ8VIG6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.3■□□□□ 0.2
TraipQ8VIG6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TraipQ8VIG6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TraipQ8VIG6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TraipQ8VIG6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TraipQ8VIG6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TraipQ8VIG6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TraipQ8VIG6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TraipQ8VIG6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TraipQ8VIG6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TraipQ8VIG6 Gm13365-201ENSMUST00000121188 973 ntBASIC16.29■□□□□ 0.2
TraipQ8VIG6 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.29■□□□□ 0.2
TraipQ8VIG6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.29■□□□□ 0.2
TraipQ8VIG6 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.29■□□□□ 0.2
TraipQ8VIG6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
TraipQ8VIG6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
TraipQ8VIG6 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TraipQ8VIG6 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TraipQ8VIG6 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TraipQ8VIG6 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TraipQ8VIG6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TraipQ8VIG6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TraipQ8VIG6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TraipQ8VIG6 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TraipQ8VIG6 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
TraipQ8VIG6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TraipQ8VIG6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms