Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.93■□□□□ 0.14
Trim60Q8VI40 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trim60Q8VI40 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.93■□□□□ 0.14
Trim60Q8VI40 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.93■□□□□ 0.14
Trim60Q8VI40 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim60Q8VI40 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim60Q8VI40 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim60Q8VI40 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trim60Q8VI40 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim60Q8VI40 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim60Q8VI40 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trim60Q8VI40 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim60Q8VI40 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim60Q8VI40 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trim60Q8VI40 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim60Q8VI40 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim60Q8VI40 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim60Q8VI40 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim60Q8VI40 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim60Q8VI40 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.92■□□□□ 0.14
Trim60Q8VI40 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim60Q8VI40 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim60Q8VI40 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Trim60Q8VI40 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim60Q8VI40 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim60Q8VI40 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim60Q8VI40 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim60Q8VI40 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim60Q8VI40 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim60Q8VI40 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim60Q8VI40 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.91■□□□□ 0.14
Trim60Q8VI40 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim60Q8VI40 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim60Q8VI40 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trim60Q8VI40 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim60Q8VI40 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.91■□□□□ 0.14
Trim60Q8VI40 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.91■□□□□ 0.14
Trim60Q8VI40 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trim60Q8VI40 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trim60Q8VI40 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim60Q8VI40 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim60Q8VI40 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim60Q8VI40 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim60Q8VI40 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.91■□□□□ 0.14
Trim60Q8VI40 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim60Q8VI40 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim60Q8VI40 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim60Q8VI40 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim60Q8VI40 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.9■□□□□ 0.14
Trim60Q8VI40 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim60Q8VI40 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.9■□□□□ 0.14
Trim60Q8VI40 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim60Q8VI40 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms