Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rpap2Q8VC34 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpap2Q8VC34 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpap2Q8VC34 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rpap2Q8VC34 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpap2Q8VC34 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpap2Q8VC34 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpap2Q8VC34 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.83■□□□□ 0.28
Rpap2Q8VC34 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpap2Q8VC34 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.83■□□□□ 0.28
Rpap2Q8VC34 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.83■□□□□ 0.28
Rpap2Q8VC34 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Rpap2Q8VC34 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpap2Q8VC34 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpap2Q8VC34 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpap2Q8VC34 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Rpap2Q8VC34 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rpap2Q8VC34 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpap2Q8VC34 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpap2Q8VC34 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpap2Q8VC34 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms