Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc9Q8VC31 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Gm18666-201ENSMUST00000190039 958 ntBASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Mtag2-201ENSMUST00000058665 714 ntBASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc9Q8VC31 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Gm15375-201ENSMUST00000119510 849 ntBASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Gm37856-201ENSMUST00000191634 999 ntBASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Gm42471-201ENSMUST00000201457 1865 ntBASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc9Q8VC31 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Gm11643-201ENSMUST00000119578 864 ntBASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Gm27275-201ENSMUST00000184318 272 ntBASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Trmt13-210ENSMUST00000198454 880 ntBASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Ap5m1-205ENSMUST00000227431 3757 ntBASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc9Q8VC31 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms