Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Cacnb1Q8R3Z5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacnb1Q8R3Z5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Cacnb1Q8R3Z5 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacnb1Q8R3Z5 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.58■□□□□ 0.4
Cacnb1Q8R3Z5 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacnb1Q8R3Z5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.58■□□□□ 0.4
Cacnb1Q8R3Z5 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.58■□□□□ 0.4
Cacnb1Q8R3Z5 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Gm25745-201ENSMUST00000174945 133 ntBASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Gm29436-202ENSMUST00000189054 1172 ntTSL 5 BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cacnb1Q8R3Z5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 4930408K08Rik-201ENSMUST00000195936 1436 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Gm38280-201ENSMUST00000192610 158 ntBASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacnb1Q8R3Z5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Gm10419-201ENSMUST00000100944 1671 ntTSL 2 BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 App-207ENSMUST00000227737 2827 ntBASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Gm7506-201ENSMUST00000207758 815 ntBASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Gm19174-201ENSMUST00000216944 956 ntBASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Wfdc12-201ENSMUST00000051272 775 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms