Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc58Q8R3Q6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc58Q8R3Q6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc58Q8R3Q6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc58Q8R3Q6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc58Q8R3Q6 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Gm30025-201ENSMUST00000218555 728 ntBASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc58Q8R3Q6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms