Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Trim29Q8R2Q0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim29Q8R2Q0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim29Q8R2Q0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trim29Q8R2Q0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Trim29Q8R2Q0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim29Q8R2Q0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim29Q8R2Q0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim29Q8R2Q0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trim29Q8R2Q0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Gm4535-201ENSMUST00000182274 558 ntBASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Birc2-201ENSMUST00000054878 378 ntBASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Gm10355-201ENSMUST00000097146 517 ntBASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim29Q8R2Q0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Gm15358-201ENSMUST00000119249 520 ntBASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Trim29Q8R2Q0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim29Q8R2Q0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim29Q8R2Q0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim29Q8R2Q0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim29Q8R2Q0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim29Q8R2Q0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim29Q8R2Q0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim29Q8R2Q0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim29Q8R2Q0 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.56■□□□□ 0.4
Trim29Q8R2Q0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim29Q8R2Q0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.56■□□□□ 0.4
Trim29Q8R2Q0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim29Q8R2Q0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trim29Q8R2Q0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim29Q8R2Q0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim29Q8R2Q0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim29Q8R2Q0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim29Q8R2Q0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Trim29Q8R2Q0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim29Q8R2Q0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim29Q8R2Q0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim29Q8R2Q0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim29Q8R2Q0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim29Q8R2Q0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trim29Q8R2Q0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim29Q8R2Q0 Gm27459-201ENSMUST00000184860 107 ntBASIC17.55■□□□□ 0.4
Trim29Q8R2Q0 Gm34391-201ENSMUST00000203706 907 ntBASIC17.55■□□□□ 0.4
Trim29Q8R2Q0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Trim29Q8R2Q0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim29Q8R2Q0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim29Q8R2Q0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim29Q8R2Q0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms