Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm22066-201ENSMUST00000103761 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm24932-201ENSMUST00000103763 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm24115-201ENSMUST00000103799 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm22190-201ENSMUST00000103827 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm22191-201ENSMUST00000103831 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm24721-201ENSMUST00000103849 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm28018-201ENSMUST00000103869 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm26399-201ENSMUST00000103937 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm24158-201ENSMUST00000175263 71 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm25349-201ENSMUST00000177728 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm23616-201ENSMUST00000177797 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm25871-201ENSMUST00000177816 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm24752-201ENSMUST00000178240 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm24496-201ENSMUST00000178287 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm25649-201ENSMUST00000178476 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm25548-201ENSMUST00000178681 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm23147-201ENSMUST00000178841 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm26095-201ENSMUST00000179270 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm22171-201ENSMUST00000179283 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm23936-201ENSMUST00000179354 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm22619-201ENSMUST00000179516 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm25255-201ENSMUST00000179579 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm24755-201ENSMUST00000179691 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm26506-201ENSMUST00000179692 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm25086-201ENSMUST00000179931 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm23243-201ENSMUST00000180047 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm24659-201ENSMUST00000180212 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm24169-201ENSMUST00000180244 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm23689-201ENSMUST00000180354 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm27359-201ENSMUST00000184153 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm27785-201ENSMUST00000184268 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm27466-201ENSMUST00000184396 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm27703-201ENSMUST00000184836 110 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm10253-201ENSMUST00000194270 940 ntBASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Gm20949-201ENSMUST00000206478 952 ntBASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp7Q8R1T1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp7Q8R1T1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp7Q8R1T1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Chmp7Q8R1T1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Chmp7Q8R1T1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC19.59■□□□□ 0.73
Chmp7Q8R1T1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp7Q8R1T1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC19.59■□□□□ 0.73
Chmp7Q8R1T1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp7Q8R1T1 Gm45293-201ENSMUST00000209754 1812 ntBASIC19.59■□□□□ 0.73
Chmp7Q8R1T1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp7Q8R1T1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp7Q8R1T1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp7Q8R1T1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp7Q8R1T1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.59■□□□□ 0.73
Chmp7Q8R1T1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp7Q8R1T1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp7Q8R1T1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp7Q8R1T1 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp7Q8R1T1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp7Q8R1T1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp7Q8R1T1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp7Q8R1T1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp7Q8R1T1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp7Q8R1T1 Gm25287-201ENSMUST00000103846 110 ntBASIC19.58■□□□□ 0.72
Chmp7Q8R1T1 Gm22918-201ENSMUST00000103855 110 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms