Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Gm14859-201ENSMUST00000117752 357 ntBASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Gm7506-201ENSMUST00000207758 815 ntBASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cchcr1Q8K2I2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cchcr1Q8K2I2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cchcr1Q8K2I2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cchcr1Q8K2I2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Gm12895-201ENSMUST00000122214 226 ntBASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.19■□□□□ 0.5
Cchcr1Q8K2I2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms