Protein–RNA interactions for Protein: Q8K2F3

Depp1, Protein DEPP1, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depp1Q8K2F3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Gm13836-201ENSMUST00000121159 501 ntBASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Depp1Q8K2F3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depp1Q8K2F3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Gm25745-201ENSMUST00000174945 133 ntBASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Gm27867-201ENSMUST00000184778 125 ntBASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depp1Q8K2F3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depp1Q8K2F3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depp1Q8K2F3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depp1Q8K2F3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depp1Q8K2F3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depp1Q8K2F3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depp1Q8K2F3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depp1Q8K2F3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depp1Q8K2F3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depp1Q8K2F3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depp1Q8K2F3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.15□□□□□ -0.3
Depp1Q8K2F3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depp1Q8K2F3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depp1Q8K2F3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depp1Q8K2F3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms