Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup88Q8CEC0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nup88Q8CEC0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup88Q8CEC0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Gm25990-201ENSMUST00000102440 86 ntBASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Nup88Q8CEC0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Nup88Q8CEC0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nup88Q8CEC0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Nup88Q8CEC0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nup88Q8CEC0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Nup88Q8CEC0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Gm4535-201ENSMUST00000182274 558 ntBASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Gm37935-201ENSMUST00000192012 982 ntBASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Gm7506-201ENSMUST00000207758 815 ntBASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Gm10355-201ENSMUST00000097146 517 ntBASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup88Q8CEC0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nup88Q8CEC0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Gm7230-201ENSMUST00000173026 815 ntBASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Nup88Q8CEC0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms