Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc60Q8C4J0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Asic1-205ENSMUST00000228185 1818 ntBASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc60Q8C4J0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Gm4899-201ENSMUST00000178708 719 ntBASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc60Q8C4J0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc60Q8C4J0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc60Q8C4J0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Ccdc60Q8C4J0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc60Q8C4J0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc60Q8C4J0 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.58■□□□□ 0.72
Ccdc60Q8C4J0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc60Q8C4J0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc60Q8C4J0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc60Q8C4J0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc60Q8C4J0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc60Q8C4J0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc60Q8C4J0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc60Q8C4J0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms