Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne1Q8C166 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.39□□□□□ -0.11
Cpne1Q8C166 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne1Q8C166 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne1Q8C166 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Cpne1Q8C166 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.39□□□□□ -0.11
Cpne1Q8C166 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.39□□□□□ -0.11
Cpne1Q8C166 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.39□□□□□ -0.11
Cpne1Q8C166 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne1Q8C166 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Cpne1Q8C166 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne1Q8C166 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne1Q8C166 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.39□□□□□ -0.11
Cpne1Q8C166 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne1Q8C166 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cpne1Q8C166 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne1Q8C166 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne1Q8C166 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne1Q8C166 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne1Q8C166 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Cpne1Q8C166 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne1Q8C166 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne1Q8C166 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne1Q8C166 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne1Q8C166 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne1Q8C166 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne1Q8C166 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cpne1Q8C166 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne1Q8C166 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne1Q8C166 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne1Q8C166 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne1Q8C166 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne1Q8C166 Gm15358-201ENSMUST00000119249 520 ntBASIC14.38□□□□□ -0.11
Cpne1Q8C166 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Cpne1Q8C166 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.38□□□□□ -0.11
Cpne1Q8C166 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.38□□□□□ -0.11
Cpne1Q8C166 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.38□□□□□ -0.11
Cpne1Q8C166 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne1Q8C166 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne1Q8C166 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne1Q8C166 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne1Q8C166 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne1Q8C166 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne1Q8C166 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne1Q8C166 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne1Q8C166 Sybu-209ENSMUST00000228639 4113 ntBASIC14.38□□□□□ -0.11
Cpne1Q8C166 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne1Q8C166 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.37□□□□□ -0.11
Cpne1Q8C166 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne1Q8C166 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne1Q8C166 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.37□□□□□ -0.11
Cpne1Q8C166 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cpne1Q8C166 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.37□□□□□ -0.11
Cpne1Q8C166 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.37□□□□□ -0.11
Cpne1Q8C166 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne1Q8C166 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne1Q8C166 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne1Q8C166 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne1Q8C166 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne1Q8C166 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne1Q8C166 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.36□□□□□ -0.11
Cpne1Q8C166 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne1Q8C166 Gm15173-201ENSMUST00000122049 433 ntBASIC14.36□□□□□ -0.11
Cpne1Q8C166 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Cpne1Q8C166 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cpne1Q8C166 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cpne1Q8C166 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne1Q8C166 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne1Q8C166 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Cpne1Q8C166 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne1Q8C166 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne1Q8C166 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne1Q8C166 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.36□□□□□ -0.11
Cpne1Q8C166 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cpne1Q8C166 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne1Q8C166 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne1Q8C166 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne1Q8C166 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cpne1Q8C166 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne1Q8C166 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms