Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Gm27646-201ENSMUST00000183989 110 ntBASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Gm6296-201ENSMUST00000222599 943 ntBASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Sh3rf3Q8C120 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Gm8344-201ENSMUST00000119813 856 ntBASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf3Q8C120 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 Gm4535-201ENSMUST00000182274 558 ntBASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 Gm10355-201ENSMUST00000097146 517 ntBASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3rf3Q8C120 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3rf3Q8C120 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3rf3Q8C120 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3rf3Q8C120 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.02■□□□□ 0.15
Sh3rf3Q8C120 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3rf3Q8C120 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3rf3Q8C120 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.02■□□□□ 0.15
Sh3rf3Q8C120 Sybu-209ENSMUST00000228639 4113 ntBASIC16.02■□□□□ 0.15
Sh3rf3Q8C120 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Sh3rf3Q8C120 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
Sh3rf3Q8C120 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms