Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp1r3eQ8BRJ4 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp1r3eQ8BRJ4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.4□□□□□ -0.1
Ppp1r3eQ8BRJ4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Ppp1r3eQ8BRJ4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
Ppp1r3eQ8BRJ4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ppp1r3eQ8BRJ4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ppp1r3eQ8BRJ4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ppp1r3eQ8BRJ4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Ppp1r3eQ8BRJ4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ppp1r3eQ8BRJ4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ppp1r3eQ8BRJ4 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ppp1r3eQ8BRJ4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ppp1r3eQ8BRJ4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ppp1r3eQ8BRJ4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ppp1r3eQ8BRJ4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ppp1r3eQ8BRJ4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms