Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm44350-201ENSMUST00000197197 138 ntBASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Gm44390-201ENSMUST00000197533 144 ntBASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Gm44313-201ENSMUST00000198018 138 ntBASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Gm44486-201ENSMUST00000198508 138 ntBASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Gm44314-201ENSMUST00000199263 138 ntBASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Gm44394-201ENSMUST00000199558 138 ntBASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Gm44484-201ENSMUST00000199873 138 ntBASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Gm44466-201ENSMUST00000200264 138 ntBASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Gm44359-201ENSMUST00000200671 138 ntBASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf4Q8BQZ5 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf4Q8BQZ5 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf4Q8BQZ5 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cpsf4Q8BQZ5 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf4Q8BQZ5 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf4Q8BQZ5 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.94□□□□□ -0.02
Cpsf4Q8BQZ5 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf4Q8BQZ5 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf4Q8BQZ5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
Cpsf4Q8BQZ5 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf4Q8BQZ5 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.94□□□□□ -0.02
Cpsf4Q8BQZ5 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf4Q8BQZ5 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf4Q8BQZ5 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf4Q8BQZ5 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4Q8BQZ5 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Mir6404-201ENSMUST00000183699 94 ntBASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Mir8098-201ENSMUST00000184011 137 ntBASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Gm28659-201ENSMUST00000188013 759 ntBASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Gm6296-201ENSMUST00000222599 943 ntBASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4Q8BQZ5 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms