Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco3Q8BQM7 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.71□□□□□ -0.37
Smco3Q8BQM7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco3Q8BQM7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco3Q8BQM7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco3Q8BQM7 Gm11539-201ENSMUST00000119837 557 ntBASIC12.71□□□□□ -0.37
Smco3Q8BQM7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco3Q8BQM7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.71□□□□□ -0.37
Smco3Q8BQM7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smco3Q8BQM7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco3Q8BQM7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smco3Q8BQM7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Smco3Q8BQM7 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smco3Q8BQM7 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.71□□□□□ -0.38
Smco3Q8BQM7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smco3Q8BQM7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smco3Q8BQM7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
Smco3Q8BQM7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smco3Q8BQM7 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Gm27463-201ENSMUST00000183569 57 ntBASIC12.7□□□□□ -0.38
Smco3Q8BQM7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.7□□□□□ -0.38
Smco3Q8BQM7 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Gm12527-201ENSMUST00000117967 564 ntBASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smco3Q8BQM7 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms