Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ckap4Q8BMK4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ckap4Q8BMK4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ckap4Q8BMK4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ckap4Q8BMK4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ckap4Q8BMK4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ckap4Q8BMK4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ckap4Q8BMK4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ckap4Q8BMK4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.6□□□□□ -0.07
Ckap4Q8BMK4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ckap4Q8BMK4 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ckap4Q8BMK4 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ckap4Q8BMK4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ckap4Q8BMK4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.6□□□□□ -0.07
Ckap4Q8BMK4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ckap4Q8BMK4 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ckap4Q8BMK4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ckap4Q8BMK4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ckap4Q8BMK4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ckap4Q8BMK4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Gm7977-201ENSMUST00000193787 748 ntBASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ckap4Q8BMK4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ckap4Q8BMK4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ckap4Q8BMK4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ckap4Q8BMK4 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ckap4Q8BMK4 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ckap4Q8BMK4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ckap4Q8BMK4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Ckap4Q8BMK4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ckap4Q8BMK4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms