Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Pcdh20Q8BIZ0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdh20Q8BIZ0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdh20Q8BIZ0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdh20Q8BIZ0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdh20Q8BIZ0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdh20Q8BIZ0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Gm15165-201ENSMUST00000118140 502 ntBASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh20Q8BIZ0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Gm43347-201ENSMUST00000200226 580 ntBASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh20Q8BIZ0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Gm12644-201ENSMUST00000119935 606 ntBASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Gm27459-201ENSMUST00000184860 107 ntBASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh20Q8BIZ0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh20Q8BIZ0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh20Q8BIZ0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh20Q8BIZ0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Pcdh20Q8BIZ0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Pcdh20Q8BIZ0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh20Q8BIZ0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh20Q8BIZ0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh20Q8BIZ0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh20Q8BIZ0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Pcdh20Q8BIZ0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdh20Q8BIZ0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdh20Q8BIZ0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh20Q8BIZ0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdh20Q8BIZ0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms