Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Gm13312-201ENSMUST00000119631 718 ntBASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf38Q8BI21 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf38Q8BI21 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gm8825-201ENSMUST00000182565 998 ntBASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gm4518-201ENSMUST00000182638 718 ntBASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gm27704-201ENSMUST00000185094 107 ntBASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.84□□□□□ -0.03
Rnf38Q8BI21 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf38Q8BI21 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf38Q8BI21 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf38Q8BI21 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf38Q8BI21 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms