Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Gm18206-201ENSMUST00000207027 926 ntBASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Gm10060-201ENSMUST00000212002 111 ntBASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Depdc1bQ8BH88 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Mir5131-201ENSMUST00000175426 93 ntBASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Gm7506-201ENSMUST00000207758 815 ntBASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Depdc1bQ8BH88 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Depdc1bQ8BH88 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Depdc1bQ8BH88 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Depdc1bQ8BH88 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Depdc1bQ8BH88 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms