Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trim50Q810I2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Gm15358-201ENSMUST00000119249 520 ntBASIC15□□□□□ -0.01
Trim50Q810I2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15□□□□□ -0.01
Trim50Q810I2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15□□□□□ -0.01
Trim50Q810I2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15□□□□□ -0.01
Trim50Q810I2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Trim50Q810I2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trim50Q810I2 Rps4l-201ENSMUST00000071745 943 ntBASIC15□□□□□ -0.01
Trim50Q810I2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
Trim50Q810I2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15□□□□□ -0.01
Trim50Q810I2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim50Q810I2 Gm45605-201ENSMUST00000210265 4269 ntBASIC15□□□□□ -0.01
Trim50Q810I2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trim50Q810I2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim50Q810I2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim50Q810I2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trim50Q810I2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 Gm25990-201ENSMUST00000102440 86 ntBASIC14.99□□□□□ -0.01
Trim50Q810I2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Trim50Q810I2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Trim50Q810I2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim50Q810I2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trim50Q810I2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim50Q810I2 Sybu-209ENSMUST00000228639 4113 ntBASIC14.98□□□□□ -0.01
Trim50Q810I2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim50Q810I2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim50Q810I2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim50Q810I2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim50Q810I2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim50Q810I2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim50Q810I2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trim50Q810I2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trim50Q810I2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim50Q810I2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim50Q810I2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim50Q810I2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim50Q810I2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Trim50Q810I2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trim50Q810I2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim50Q810I2 Gm6376-201ENSMUST00000209407 580 ntBASIC14.98□□□□□ -0.01
Trim50Q810I2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.98□□□□□ -0.01
Trim50Q810I2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim50Q810I2 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.98□□□□□ -0.01
Trim50Q810I2 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.98□□□□□ -0.01
Trim50Q810I2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim50Q810I2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim50Q810I2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim50Q810I2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim50Q810I2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim50Q810I2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim50Q810I2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim50Q810I2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim50Q810I2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trim50Q810I2 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.98□□□□□ -0.01
Trim50Q810I2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Trim50Q810I2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim50Q810I2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim50Q810I2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.97□□□□□ -0.01
Trim50Q810I2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim50Q810I2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms