Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Gm25406-201ENSMUST00000157599 105 ntBASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Gm6623-201ENSMUST00000173570 544 ntBASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3bQ80YF6 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Upk3bQ80YF6 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Upk3bQ80YF6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Upk3bQ80YF6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Gm9013-201ENSMUST00000132939 882 ntBASIC13□□□□□ -0.33
Upk3bQ80YF6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13□□□□□ -0.33
Upk3bQ80YF6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13□□□□□ -0.33
Upk3bQ80YF6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13□□□□□ -0.33
Upk3bQ80YF6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13□□□□□ -0.33
Upk3bQ80YF6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Gm37736-201ENSMUST00000193564 2802 ntBASIC13□□□□□ -0.33
Upk3bQ80YF6 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Upk3bQ80YF6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13□□□□□ -0.33
Upk3bQ80YF6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Upk3bQ80YF6 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3bQ80YF6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms