Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vrk1Q80X41 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.68□□□□□ -0.06
Vrk1Q80X41 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Vrk1Q80X41 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Vrk1Q80X41 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vrk1Q80X41 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.67□□□□□ -0.06
Vrk1Q80X41 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Gm15427-201ENSMUST00000117288 531 ntBASIC14.67□□□□□ -0.06
Vrk1Q80X41 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.67□□□□□ -0.06
Vrk1Q80X41 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Vrk1Q80X41 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Vrk1Q80X41 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.66□□□□□ -0.06
Vrk1Q80X41 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Vrk1Q80X41 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.66□□□□□ -0.06
Vrk1Q80X41 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vrk1Q80X41 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.66□□□□□ -0.06
Vrk1Q80X41 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.66□□□□□ -0.06
Vrk1Q80X41 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Vrk1Q80X41 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Vrk1Q80X41 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vrk1Q80X41 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vrk1Q80X41 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vrk1Q80X41 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vrk1Q80X41 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vrk1Q80X41 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vrk1Q80X41 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vrk1Q80X41 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vrk1Q80X41 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.65□□□□□ -0.06
Vrk1Q80X41 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.65□□□□□ -0.06
Vrk1Q80X41 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.65□□□□□ -0.06
Vrk1Q80X41 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.65□□□□□ -0.06
Vrk1Q80X41 Gm44872-201ENSMUST00000207864 420 ntBASIC14.65□□□□□ -0.06
Vrk1Q80X41 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vrk1Q80X41 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.65□□□□□ -0.06
Vrk1Q80X41 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.65□□□□□ -0.06
Vrk1Q80X41 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.65□□□□□ -0.06
Vrk1Q80X41 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Vrk1Q80X41 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms