Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Gm36967-201ENSMUST00000193814 266 ntBASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf40bQ80W14 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.71■□□□□ 0.43
Prpf40bQ80W14 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 Gm13365-201ENSMUST00000121188 973 ntBASIC17.71■□□□□ 0.43
Prpf40bQ80W14 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.71■□□□□ 0.43
Prpf40bQ80W14 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf40bQ80W14 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Prpf40bQ80W14 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.71■□□□□ 0.42
Prpf40bQ80W14 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Prpf40bQ80W14 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Prpf40bQ80W14 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.7■□□□□ 0.42
Prpf40bQ80W14 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf40bQ80W14 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms