Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.91■□□□□ 0.14
Trim62Q80V85 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim62Q80V85 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim62Q80V85 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim62Q80V85 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.91■□□□□ 0.14
Trim62Q80V85 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim62Q80V85 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim62Q80V85 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim62Q80V85 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim62Q80V85 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim62Q80V85 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.91■□□□□ 0.14
Trim62Q80V85 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.91■□□□□ 0.14
Trim62Q80V85 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim62Q80V85 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim62Q80V85 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.91■□□□□ 0.14
Trim62Q80V85 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim62Q80V85 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim62Q80V85 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim62Q80V85 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim62Q80V85 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim62Q80V85 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Trim62Q80V85 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim62Q80V85 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim62Q80V85 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trim62Q80V85 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim62Q80V85 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim62Q80V85 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim62Q80V85 Gm18206-201ENSMUST00000207027 926 ntBASIC15.9■□□□□ 0.14
Trim62Q80V85 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.9■□□□□ 0.14
Trim62Q80V85 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim62Q80V85 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trim62Q80V85 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim62Q80V85 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.9■□□□□ 0.14
Trim62Q80V85 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim62Q80V85 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim62Q80V85 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.9■□□□□ 0.14
Trim62Q80V85 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim62Q80V85 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Trim62Q80V85 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim62Q80V85 Dancr-204ENSMUST00000132389 2347 ntBASIC15.9■□□□□ 0.14
Trim62Q80V85 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim62Q80V85 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim62Q80V85 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trim62Q80V85 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trim62Q80V85 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Trim62Q80V85 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.89■□□□□ 0.13
Trim62Q80V85 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 Grk6-207ENSMUST00000225925 2769 ntBASIC15.89■□□□□ 0.13
Trim62Q80V85 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.89■□□□□ 0.13
Trim62Q80V85 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.89■□□□□ 0.13
Trim62Q80V85 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.89■□□□□ 0.13
Trim62Q80V85 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.89■□□□□ 0.13
Trim62Q80V85 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.89■□□□□ 0.13
Trim62Q80V85 Gm4899-201ENSMUST00000178708 719 ntBASIC15.89■□□□□ 0.13
Trim62Q80V85 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.89■□□□□ 0.13
Trim62Q80V85 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trim62Q80V85 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim62Q80V85 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim62Q80V85 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trim62Q80V85 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim62Q80V85 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim62Q80V85 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim62Q80V85 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim62Q80V85 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim62Q80V85 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim62Q80V85 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim62Q80V85 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim62Q80V85 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim62Q80V85 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim62Q80V85 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.88■□□□□ 0.13
Trim62Q80V85 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim62Q80V85 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim62Q80V85 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trim62Q80V85 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trim62Q80V85 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim62Q80V85 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim62Q80V85 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim62Q80V85 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim62Q80V85 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim62Q80V85 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim62Q80V85 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms