Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.34■□□□□ 0.05
Rpp38Q80UU2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Rpp38Q80UU2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.34■□□□□ 0.05
Rpp38Q80UU2 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.34■□□□□ 0.05
Rpp38Q80UU2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp38Q80UU2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.34■□□□□ 0.05
Rpp38Q80UU2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp38Q80UU2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp38Q80UU2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp38Q80UU2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp38Q80UU2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp38Q80UU2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp38Q80UU2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp38Q80UU2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp38Q80UU2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.34■□□□□ 0.05
Rpp38Q80UU2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp38Q80UU2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp38Q80UU2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp38Q80UU2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp38Q80UU2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp38Q80UU2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rpp38Q80UU2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Gm13036-201ENSMUST00000117799 748 ntBASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Gm45167-201ENSMUST00000208007 322 ntBASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Gm7787-201ENSMUST00000216858 688 ntBASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp38Q80UU2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Celf4-206ENSMUST00000224553 1729 ntBASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.32■□□□□ 0.04
Rpp38Q80UU2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.32■□□□□ 0.04
Rpp38Q80UU2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp38Q80UU2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms