Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.82■□□□□ 0.28
Ctdp1Q7TSG2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.82■□□□□ 0.28
Ctdp1Q7TSG2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ctdp1Q7TSG2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.82■□□□□ 0.28
Ctdp1Q7TSG2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Ctdp1Q7TSG2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.82■□□□□ 0.28
Ctdp1Q7TSG2 Gm27704-201ENSMUST00000185094 107 ntBASIC16.82■□□□□ 0.28
Ctdp1Q7TSG2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ctdp1Q7TSG2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ctdp1Q7TSG2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ctdp1Q7TSG2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ctdp1Q7TSG2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
Ctdp1Q7TSG2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ctdp1Q7TSG2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ctdp1Q7TSG2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Ctdp1Q7TSG2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.82■□□□□ 0.28
Ctdp1Q7TSG2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Gm45328-201ENSMUST00000210942 917 ntBASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ctdp1Q7TSG2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Gm7284-201ENSMUST00000131667 944 ntBASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctdp1Q7TSG2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 Gm10052-201ENSMUST00000168019 960 ntBASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 Gm7729-201ENSMUST00000050143 801 ntBASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Ctdp1Q7TSG2 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.78■□□□□ 0.28
Ctdp1Q7TSG2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms