Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Gm27011-201ENSMUST00000182352 972 ntBASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx4Q7TNK1 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Gm22240-201ENSMUST00000175225 82 ntBASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx4Q7TNK1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfx4Q7TNK1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Rfx4Q7TNK1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Rfx4Q7TNK1 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfx4Q7TNK1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.77□□□□□ -0.04
Rfx4Q7TNK1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfx4Q7TNK1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfx4Q7TNK1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfx4Q7TNK1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfx4Q7TNK1 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Rfx4Q7TNK1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfx4Q7TNK1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfx4Q7TNK1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfx4Q7TNK1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Rfx4Q7TNK1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.77□□□□□ -0.05
Rfx4Q7TNK1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx4Q7TNK1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx4Q7TNK1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx4Q7TNK1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx4Q7TNK1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx4Q7TNK1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Rfx4Q7TNK1 Gm10812-201ENSMUST00000099864 546 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms