Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sox11Q7M6Y2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox11Q7M6Y2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Sox11Q7M6Y2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox11Q7M6Y2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox11Q7M6Y2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox11Q7M6Y2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Rprl2-201ENSMUST00000157150 290 ntBASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.53■□□□□ 0.08
Sox11Q7M6Y2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sox11Q7M6Y2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox11Q7M6Y2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox11Q7M6Y2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox11Q7M6Y2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox11Q7M6Y2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Sox11Q7M6Y2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox11Q7M6Y2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox11Q7M6Y2 Gm11745-201ENSMUST00000121669 448 ntBASIC15.52■□□□□ 0.08
Sox11Q7M6Y2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sox11Q7M6Y2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox11Q7M6Y2 Gm18889-201ENSMUST00000174284 929 ntBASIC15.52■□□□□ 0.08
Sox11Q7M6Y2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sox11Q7M6Y2 Gm43474-201ENSMUST00000196415 774 ntBASIC15.52■□□□□ 0.08
Sox11Q7M6Y2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.52■□□□□ 0.08
Sox11Q7M6Y2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox11Q7M6Y2 Thap2-203ENSMUST00000218989 527 ntBASIC15.52■□□□□ 0.08
Sox11Q7M6Y2 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.52■□□□□ 0.08
Sox11Q7M6Y2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sox11Q7M6Y2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Sox11Q7M6Y2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Sox11Q7M6Y2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sox11Q7M6Y2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sox11Q7M6Y2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sox11Q7M6Y2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Sox11Q7M6Y2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Sox11Q7M6Y2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sox11Q7M6Y2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sox11Q7M6Y2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sox11Q7M6Y2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox11Q7M6Y2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox11Q7M6Y2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox11Q7M6Y2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Sox11Q7M6Y2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox11Q7M6Y2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox11Q7M6Y2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms