Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vma21Q78T54 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vma21Q78T54 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vma21Q78T54 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vma21Q78T54 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vma21Q78T54 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vma21Q78T54 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vma21Q78T54 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vma21Q78T54 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vma21Q78T54 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.55□□□□□ -0.4
Vma21Q78T54 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vma21Q78T54 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vma21Q78T54 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vma21Q78T54 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vma21Q78T54 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vma21Q78T54 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.54□□□□□ -0.4
Vma21Q78T54 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.54□□□□□ -0.4
Vma21Q78T54 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.54□□□□□ -0.4
Vma21Q78T54 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Vma21Q78T54 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Vma21Q78T54 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Vma21Q78T54 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Gm25016-201ENSMUST00000158399 131 ntBASIC12.54□□□□□ -0.4
Vma21Q78T54 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Vma21Q78T54 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.54□□□□□ -0.4
Vma21Q78T54 Gm7367-201ENSMUST00000057611 492 ntBASIC12.54□□□□□ -0.4
Vma21Q78T54 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Vma21Q78T54 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.54□□□□□ -0.4
Vma21Q78T54 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.54□□□□□ -0.4
Vma21Q78T54 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vma21Q78T54 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.53□□□□□ -0.4
Vma21Q78T54 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Vma21Q78T54 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.53□□□□□ -0.4
Vma21Q78T54 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Vma21Q78T54 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Vma21Q78T54 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.53□□□□□ -0.4
Vma21Q78T54 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.53□□□□□ -0.4
Vma21Q78T54 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.53□□□□□ -0.4
Vma21Q78T54 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Vma21Q78T54 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vma21Q78T54 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Vma21Q78T54 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vma21Q78T54 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Vma21Q78T54 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vma21Q78T54 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.52□□□□□ -0.4
Vma21Q78T54 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vma21Q78T54 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vma21Q78T54 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.52□□□□□ -0.4
Vma21Q78T54 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Vma21Q78T54 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vma21Q78T54 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vma21Q78T54 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vma21Q78T54 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vma21Q78T54 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vma21Q78T54 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vma21Q78T54 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Vma21Q78T54 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms