Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx58Q6Q899 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx58Q6Q899 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Ddx58Q6Q899 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.95■□□□□ 0.62
Ddx58Q6Q899 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ddx58Q6Q899 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx58Q6Q899 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Ddx58Q6Q899 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.95■□□□□ 0.62
Ddx58Q6Q899 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx58Q6Q899 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.95■□□□□ 0.62
Ddx58Q6Q899 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.95■□□□□ 0.62
Ddx58Q6Q899 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ddx58Q6Q899 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx58Q6Q899 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.95■□□□□ 0.62
Ddx58Q6Q899 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ddx58Q6Q899 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx58Q6Q899 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx58Q6Q899 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx58Q6Q899 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.95■□□□□ 0.62
Ddx58Q6Q899 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx58Q6Q899 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.94■□□□□ 0.62
Ddx58Q6Q899 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx58Q6Q899 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx58Q6Q899 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx58Q6Q899 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx58Q6Q899 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.94■□□□□ 0.62
Ddx58Q6Q899 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx58Q6Q899 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.94■□□□□ 0.62
Ddx58Q6Q899 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.94■□□□□ 0.62
Ddx58Q6Q899 Gm10154-201ENSMUST00000084445 354 ntBASIC18.94■□□□□ 0.62
Ddx58Q6Q899 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Ddx58Q6Q899 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx58Q6Q899 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
Ddx58Q6Q899 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ddx58Q6Q899 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx58Q6Q899 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx58Q6Q899 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx58Q6Q899 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx58Q6Q899 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx58Q6Q899 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx58Q6Q899 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 App-207ENSMUST00000227737 2827 ntBASIC18.93■□□□□ 0.62
Ddx58Q6Q899 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.93■□□□□ 0.62
Ddx58Q6Q899 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx58Q6Q899 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms