Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Rif1Q6PR54 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rif1Q6PR54 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rif1Q6PR54 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rif1Q6PR54 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.93□□□□□ -0.34
Rif1Q6PR54 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rif1Q6PR54 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rif1Q6PR54 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rif1Q6PR54 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rif1Q6PR54 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rif1Q6PR54 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rif1Q6PR54 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rif1Q6PR54 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rif1Q6PR54 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rif1Q6PR54 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.93□□□□□ -0.34
Rif1Q6PR54 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.93□□□□□ -0.34
Rif1Q6PR54 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rif1Q6PR54 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.93□□□□□ -0.34
Rif1Q6PR54 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Rif1Q6PR54 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Gm15823-201ENSMUST00000064305 670 ntBASIC12.92□□□□□ -0.34
Rif1Q6PR54 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rif1Q6PR54 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Mir7070-201ENSMUST00000183657 86 ntBASIC12.91□□□□□ -0.34
Rif1Q6PR54 Mir6404-201ENSMUST00000183699 94 ntBASIC12.91□□□□□ -0.34
Rif1Q6PR54 Gm4857-201ENSMUST00000192718 785 ntBASIC12.91□□□□□ -0.34
Rif1Q6PR54 Gm38225-201ENSMUST00000194001 393 ntBASIC12.91□□□□□ -0.34
Rif1Q6PR54 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.91□□□□□ -0.34
Rif1Q6PR54 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.91□□□□□ -0.34
Rif1Q6PR54 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.91□□□□□ -0.34
Rif1Q6PR54 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Gm14660-201ENSMUST00000119809 575 ntBASIC12.91□□□□□ -0.34
Rif1Q6PR54 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.91□□□□□ -0.34
Rif1Q6PR54 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.91□□□□□ -0.34
Rif1Q6PR54 Gm10154-201ENSMUST00000084445 354 ntBASIC12.91□□□□□ -0.34
Rif1Q6PR54 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms