Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.14■□□□□ 0.17
Prrt3Q6PE13 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Prrt3Q6PE13 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.14■□□□□ 0.17
Prrt3Q6PE13 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prrt3Q6PE13 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prrt3Q6PE13 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prrt3Q6PE13 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prrt3Q6PE13 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Prrt3Q6PE13 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.14■□□□□ 0.17
Prrt3Q6PE13 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.14■□□□□ 0.17
Prrt3Q6PE13 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC16.14■□□□□ 0.17
Prrt3Q6PE13 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Prrt3Q6PE13 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prrt3Q6PE13 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prrt3Q6PE13 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prrt3Q6PE13 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prrt3Q6PE13 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prrt3Q6PE13 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prrt3Q6PE13 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prrt3Q6PE13 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.14■□□□□ 0.17
Prrt3Q6PE13 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prrt3Q6PE13 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Prrt3Q6PE13 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prrt3Q6PE13 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.12■□□□□ 0.17
Prrt3Q6PE13 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prrt3Q6PE13 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Prrt3Q6PE13 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prrt3Q6PE13 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Prrt3Q6PE13 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Prrt3Q6PE13 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prrt3Q6PE13 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prrt3Q6PE13 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prrt3Q6PE13 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prrt3Q6PE13 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Prrt3Q6PE13 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms