Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcc2Q6PDG5 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcc2Q6PDG5 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcc2Q6PDG5 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Smarcc2Q6PDG5 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcc2Q6PDG5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Smarcc2Q6PDG5 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcc2Q6PDG5 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcc2Q6PDG5 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.93■□□□□ 0.46
Smarcc2Q6PDG5 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcc2Q6PDG5 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcc2Q6PDG5 Gm6089-201ENSMUST00000197666 938 ntBASIC17.93■□□□□ 0.46
Smarcc2Q6PDG5 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcc2Q6PDG5 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcc2Q6PDG5 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcc2Q6PDG5 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcc2Q6PDG5 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcc2Q6PDG5 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcc2Q6PDG5 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Smarcc2Q6PDG5 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Gm7230-201ENSMUST00000173026 815 ntBASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcc2Q6PDG5 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcc2Q6PDG5 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcc2Q6PDG5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Smarcc2Q6PDG5 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcc2Q6PDG5 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcc2Q6PDG5 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.91■□□□□ 0.46
Smarcc2Q6PDG5 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcc2Q6PDG5 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcc2Q6PDG5 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.91■□□□□ 0.46
Smarcc2Q6PDG5 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.91■□□□□ 0.46
Smarcc2Q6PDG5 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.91■□□□□ 0.46
Smarcc2Q6PDG5 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Smarcc2Q6PDG5 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Smarcc2Q6PDG5 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcc2Q6PDG5 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcc2Q6PDG5 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcc2Q6PDG5 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcc2Q6PDG5 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Smarcc2Q6PDG5 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.91■□□□□ 0.46
Smarcc2Q6PDG5 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Smarcc2Q6PDG5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Smarcc2Q6PDG5 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Smarcc2Q6PDG5 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Smarcc2Q6PDG5 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Smarcc2Q6PDG5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms