Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd3Q6P9Z1 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Gm25406-201ENSMUST00000157599 105 ntBASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Gm25016-201ENSMUST00000158399 131 ntBASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd3Q6P9Z1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms